PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn273871
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Nin-like
Protein Properties Length: 469aa    MW: 53955.1 Da    PI: 8.4169
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn273871genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK33.21e-101031282752
      RWP-RK  27 vclTvLKriCRqyGIkRWPhRkiksl 52 
                 v+ ++ Kr CR+yGI+RWP R + ++
  Achn273871 103 VSISTFKRVCRKYGINRWPPRNVDKV 128
                 999*******************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF020428.9E-898128IPR003035RWP-RK domain
SuperFamilySSF542771.21E-17164257No hitNo description
PfamPF005642.5E-16172253IPR000270PB1 domain
PROSITE profilePS5174523.227172255IPR000270PB1 domain
SMARTSM006663.6E-15172255IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.1E-16172252No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MVVLMRRHSG KEKFSPNKRL GFECFDSCKH HEMREKNGNI AHKKAFAEME RVLRLLLKIY  60
KLPLALTWVS CGACKTLLPV KDLYMIRDYD YVAFRELHTF SMVSISTFKR VCRKYGINRW  120
PPRNVDKVRP PASHVDHQEE VPQLNSNLPS NQASASIAHT QPHDTVMQNA NTVNVKAKYG  180
NDITIKFQLS LSSGLVELQQ QVAKRLNLEV GSYHIKYKDE EDELILIACD EDLQDCIHTC  240
RSPGSNAVIL HIDPISQVYH TKSVTPVSYI DCFPASLRPY IRHVKDVAFD GNCGFRAIAG  300
LMNIGEEDGW VQVRRDLLTE LNLHVDDYKI MYGQQRIDEL THCLSWFDGC AEMDRWMTMP  360
DMGHLIASRY NIVLYHLSNK QCLTFLPLRS LPIPAASRRY ITIGFVNNNH FVKVFLFPGH  420
PVPPVARLWM QYRYQCAQGW DTTYNGRIQQ FRELVNSNVT TTDVISLY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.11e-17NIN like protein 7